targetscan.Mm.egFAMILY2MIRBASE {targetscan.Mm.eg.db}R Documentation

An annotation data object that maps miRNA families to miRBase identifiers

Description

targetscan.Mm.egFAMILY2MIRBASE maps miRNA family names to miRBase identifiers. The mappings are taken from the TargetScan database.

Details

This is an R object containing key and value pairs. Keys are miRNA family names and values are miRBase identifiers. Values are vectors of various lengths, as a single miRNA family usually corresponds to many miRBase miRNAs.

References

http://www.targetscan.org for TargetScan and http://microrna.sanger.ac.uk/sequences/ for miRBase.

Examples

## Map some random miRNA families
fams <- sample(ls(targetscan.Mm.egFAMILY2MIRBASE), 3)
mget(fams, targetscan.Mm.egFAMILY2MIRBASE)

[Package targetscan.Mm.eg.db version 5.0-1 Index]