targetscan.Mm.egMIRBASE2FAMILY {targetscan.Mm.eg.db}R Documentation

An annotation data object that maps miRBase identifiers to miRNA family names

Description

targetscan.Mm.egMIRBASE2FAMILY maps miRBase identifiers to miRNA family names. The mappings are taken from the TargetScan database.

Details

This is an R object containing key and value pairs. Keys are miRBase identifieers and values are miRNA family names. Values are vectors of length 1, as a miRBase miRNA belongs to a single miRNA family.

References

http://www.targetscan.org for TargetScan and http://microrna.sanger.ac.uk/sequences/ for miRBase.

Examples

## Map some random miRBase miRNAs
fams <- sample(ls(targetscan.Mm.egMIRBASE2FAMILY), 3)
mget(fams, targetscan.Mm.egMIRBASE2FAMILY)

[Package targetscan.Mm.eg.db version 5.0-1 Index]