Research staff

A | B | C | D | E | G | K | L | M | O | P | Q | R | S | T | Z
 

A

©Marie-France Arnold

Baroj Abdulkarim
Postdoctoral position, Group Marques

 

B

Bedoni Nicola.jpg

Nicola Bedoni
Graduate Assistant, Group Rivolta

 

Research project: Study of Inherited Retinal Degenerations using whole genome sequencing and autozygome-based analysis

Keywords: Next generation sequencing, bioinformatics, molecular biology, inheritance, human genetics

Personal link: Linkedin

   
Biasini Adriano.jpg

Adriano Biasini
Doctoral Student SNSF, Group Marques

   
Bilgin Sonay Tugce.jpg

Tugce Bilgin Sonay
Research Associate, Group Dessimoz

 

Research project: Evolution of gene regulation through long non-coding RNA

Keywords: lincRNA, evolution, gene expression, cis-regulation, positive selection

Personal link: tugcebilgin.net

   

BIO_1172.jpg

 

Anneke Brümmer
Postdoctoral position, Group Bergmann

 

Research project: Analysing properties of lincRNAs and mRNAs to understand why lincRNAs are not translated

Keywords: computational RNA biology, lincRNAs, translation, codon usage, tRNA abundance

 

C

Choobdar Sarvenaz.jpg

Sarvenaz Choobdar
Postdoctoral position, Group Bergmann

   
Cisarova Katarina.jpg

Katarina Cisarova
Graduate Assistant, Group Rivolta

   
Florian Clemente.jpg Florian Clemente
Postdoctoral position, Group Malaspinas
   

Diana Cruz Davalos.png


Diana Cruz Davalos
Doctoral Student SNSF, Group Malaspinas
 

D

   
Jyoti Dalal.jpg

Jyoti Dalal
Doctoral Student, Group Malaspinas

   
De Oliveira Martins Leonardo.jpg

Leonardo De Oliveira Martins
Postdoctoral Researcher SNSF, Group Dessimoz

 

Research project: Clustering and visualisation models for comparing gene families

Keywords: Phylogenomics, species trees, clustering, genomics, visualisation

Personal link: www.leomartins.org

   
Duchen Bocangel Pablo.jpg

Pablo Duchén Bocángel
Postdoctoral position, Group Salamin

   
Dylus David.jpg

David Dylus
Postdoctoral position, Group Dessimoz

 

Research projects:
- Fast phylogenomic data generation from reads by sidestepping assembly, annotation and orthology prediction
- Tree visualisation and side by side tree comparison using phylo.io
- Benchmarking of NGS pipelinesfor outbreak detection within hospitals in Switzerland

Keywords: Phylogenomics, benchmarking, visualisation, evolution, orthology

Personal links:
- Linkedin
- https://github.com/dvdylus

 

E

El Zaoui Ikram.jpg

Ikram El Zaoui
Postdoctoral position, Group Rivolta

 

G

Gaboriau.jpg

Théo Gaboriau
Postdoctoral position, Group Salamin

   
Arnaud Gaigher.png

Arnaud Gaigher
Postdoctoral position, Group Salamin
 

   
Alberto Garcia Jimenez_3.jpg Alberto Garcia Jimenez
Doctoral Student, Group Salamin
   
Glover Natasha.jpg
 

Natasha Glover
Postdoctoral position, Group Dessimoz

   
kimberly Gilbert.jpg

Kimberly Julie Gilbert
Postdoctoral position, Group Dessimoz

   
   
H  
   
Sara Heim_2.jpg Sara Heim
Doctoral Student, Group Salamin
   
DBC_5619.jpg
 

Robin Hofmeister
Doctoral Student, Group Delaneau

   
   
I  
Iyer_1.jpg
 
Arvind Iyer
Doctoral Student, Group Ciriello
   

 

K

Khalili Bita-resize200x279.jpg

Bita Khalili
Postdoctoral position, Group Bergmann

   
Kousathanas Athanasios.jpg

Athanasios Kousathanas
Postdoctoral position, Group Robinson

   
Daniel Krefl_2.jpg Daniel Krefl
Postdoctoral position, Group Bergmann
   

 

L

Liu Yuanlong.jpg

Yuanlong Liu
Postdoctoral position, Group Ciriello

 

Research project: Using computational approaches to understand the structural variations in the 3D genome and their impact on cancer

Keywords: Cancer genomics, 3D genome, Hi-C data analysis, computational oncology

 

   
Loiseau Oriane.jpg

Oriane Loiseau
Graduate Assistant, Group Salamin

 

M

Marcionetti Anna.jpg

Anna Marcionetti
Doctoral Student SNSF, Group Salamin

   
Mendes De Farias Tarcisio.jpg

Tarcisio Mendes De Farias
Postdoctoral position, Group Dessimoz

 

Research project: BioSODA: An intuitive search function for bioinformatics databases

Keywords: Natural language processing, semantic web, data integration, biological ontolgies, heterogeneous databases

Personal link: Linkedin

   
Frédéric Michaud-resize200x280.jpg

Frédéric Michaud
Postdoctoral position, Group Malaspinas

   
Mina Marco.jpg

Marco Mina
Postdoctoral position, Group Ciriello

   
Moi David.jpg

David Moi
Research Associate, Group Dessimoz

   
Mota.jpg

Barbara Mota
Doctoral Student, Group Malaspinas & Delaneau

   
N  
   
Nevers.jpg
 

Yannis Nevers
Doctoral Student, Group Dessimoz

   
   
   
   

 

O

Sven Erik Ojavee photo DBC.jpg

Sven Erik Ojavee
Graduate Assistant, Group Robinson

 

P

Patxot Bertran Marion-resize200x279.jpg
Marion Patxot Bertran
Doctoral Student SNSF, Group Robinson
 
   
Peter Virginie.jpg

Virginie Peter
Doctoral Student, Group Rivolta

 

Research project: Genomics of retinal degenerations and the clinical and molecular characterization of a cohort of patients in Portugal with inherited retinal degeneration

Keywords: Inherited Retinal Degenerations, NGS, mendelian, bioinformatics, functional studies

 

Q

Quinodoz Mathieu.jpg

Mathieu Quinodoz
Graduate Assistant, Group Rivolta

 

Research project: Using computer-based OMICS such as whole exome or genome sequencing, RNA-Seq, ChIP-Seq or long-reads sequencing to analyze human Mendelian disorders

Keywords: Sequencing, disease, machine-learning, retinal degeneration, molecular biology

 

R

Rama Ballesteros Rocio.jpg

Rocio Rama Ballesteros
Doctoral Student SNSF, Group Salamin

   
Raynaud Franck.jpg

Franck Raynaud
Postdoctoral position, Group Ciriello

   
Diogo Ribeiro.jpg

Diogo M. Ribeiro
Postdoctoral position, Group Delaneau

   
Rossier.jpg

Victor Rossier
Doctoral Student SNSF, Group Dessimoz (co-supervised by Marc Robinson-Rechavi, DEE)

 

S

Schmid Sarah.jpg

Sarah Schmid
Graduate Assistant, Group Salamin

 

Research project: Genomics of adaptive radiation in clownfish

Keywords: Hybridization, mutualism, transcriptomics, speciation, phylogeny

   
Sonmez Reyhan.jpg

Reyhan Sönmez Flitman
Doctoral Student, Group Bergmann

 

T

Tan Jennifer.jpg

Yihong Jennifer Tan
Postdoctoral position, Group Marques

 

Research project: An unexpected contribution of lincRNA splicing to enhancer-associated gene regulation in cis

Keywords: Enhancer, intergenic lon noncoding RNA, splicing, transcription, cis gene regulation

   
Tavernari Daniele_2502-1-resize200x280.jpg

Daniele Tavernari
Doctoral Student SNSF, Group Ciriello

 

Research project: Genomic and epigenetic heterogeneity of lung adenocarcinoma

Keywords: Genomics, epigenetics, cancer, computational biology, tumor heterogeneity

Personal link: Linkedin

   
Tomasoni Mattia.jpg

Mattia Tomasoni
Graduate Assistant, Group Bergmann

   
Train Clément-resize200x280.jpg

Clément Train
Doctoral Student SNSF, Group Dessimoz

 

Research project: Inferring hierarchical orthologous groups

Keywords: Phylogenetic, evolution, orthology, visualisation, clustering

Personal link: Linkedin

   
Trejo Banos Daniel.jpg

Daniel Trejo Baños
Postdoctoral position, Group Robinson

 

Z

Zufferey Marie.jpg

Marie Zufferey
Doctoral Student, Group Ciriello

 

Research project: Topologically associating domains: detection, function and role in cancer

Keywords: Hi-C, TAD, chromatin organization, tridimensional genome, cancer

   

Photos ©Marie-France Arnold

 

 

Génopode - CH-1015 Lausanne
Switzerland
Tel. +41 21 692 53 97