|
| Gene |
AGI |
Gene accession no. |
EST accession no. |
EST ID no. |
Description |
Category |
| 4CL |
At1g51680 |
U18675 |
N96648 |
G2D3T7 |
4-coumarate:CoA ligase |
Aromatic metabolism |
| a-TUB |
At1g04820 |
M84697 |
H37663 |
184O22T7 |
Alpha-2-tubulin |
Control |
| AC1 |
At1g60710 |
AC002292 |
H76534 |
197I20T7 |
Unknown (pathogen induced) |
Pathogenesis-related proteins |
| ACC2 |
At4g26200 |
M95595 |
N65643 |
240L12T7 |
ACC synthase |
Signal, regulatory functions, others |
| ACO1 |
At1g05010 |
X66719 |
R90435 |
187C14T7 |
ACC oxidase |
Signal, regulatory functions, others |
| ACT |
At1g49240 |
U41998 |
N38701 |
222G17T7 |
Actin 2 |
Control |
| ACX1 |
At4g16760 |
AF057044 |
T20673 |
90D5T7 |
Acyl-coA-oxidase |
Fatty acid signalling and metabolism |
| ACX1bis |
At4g16760 |
AF057044 |
W43736 |
H4E4T7 |
Acyl-coA-oxidase |
Fatty acid signalling and metabolism |
| ACX2 |
At5g65110 |
AF057043 |
T43584 |
121E5T7 |
Acyl-coA-oxidase |
Fatty acid signalling and metabolism |
| ADL4 |
At3g60190 |
AF180733 |
N37858 |
212B20T7 |
Dynamin-like protein |
Signal, regulatory functions, others |
| AIG1 |
At1g33970 |
U40856 |
T21212 |
93C23T7 |
Unknown |
Pathogenesis-related proteins |
| AIG2 |
At3g28940 |
U40857 |
T45237 |
82H1T7 |
Unknown |
Pathogenesis-related proteins |
| AIM1 |
At4g29010 |
AF123253 |
Z31666 |
ATTS2679 |
Multifuctional protein (beta-oxidation) |
Fatty acid signalling and metabolism |
| AOS |
At5g42650 |
X92510 |
N65720 |
230J8T7 |
Allene oxide synthase |
Fatty acid signalling and metabolism |
| APX1 |
At1g07890 |
D14442 |
H76337 |
193B8T7 |
Ascorbate peroxidase |
Oxidative stress |
| AR2 |
At4g24520 |
X66017 |
Z30954 |
ATTS2670 |
NADPH:Cytochrome P450 reductase |
Aromatic metabolism |
| ARAB1 |
At1g28670 |
U38916 |
Z34149 |
ATTS3183 |
Myrosinase associated protein |
Defense compounds |
| ASA1 |
At5g05730 |
M92353 |
N65620 |
240I16T7 |
Anthranilate synthase alpha ss |
Tryptophan pathway |
| ASB |
At1g25220 |
L22585 |
AA597789 |
241P6T7 |
Anthranilate synthase beta ss |
Tryptophan pathway |
| ATER |
At5g10810 |
U67398 |
T22902 |
108A22T7 |
Enhancer of rudimentary homologue |
Signal, regulatory functions, others |
| AWI31 |
At4g24220 |
X99793 |
N95996 |
F4C1T7 |
Unknown |
Signal, regulatory functions, others |
| b-TUB |
At5g44340 |
M84706 |
AA597455 |
198P12T7 |
Beta-9-tubulin |
Control |
| CAB (LHB1B2) |
At2g34420 |
X64460 |
R89981 |
187D7T7 |
Chlorophyll a/b binding protein |
Control |
| CABbis (LHB1B2) |
At2g34420 |
X64460 |
N65355 |
227C12T7 |
Chlorophyll a/b binding protein |
Control |
| CAD |
At4g39330 |
L37883 |
T42873 |
119G15T7 |
Cinamyl alcohol dehydrogenase |
Aromatic metabolism |
| CCOAMT |
At1g67980 |
L40031 |
R84053 |
132K23T7 |
O-methyl transferase |
Aromatic metabolism |
| CCR |
At1g15950 |
AC010924 |
T41765 |
67E6T7 |
Cinnamoyl-CoA reductase |
Aromatic metabolism |
| CCR1 |
At4g39260 |
L04171 |
R84052 |
132I20T7 |
Glycine-rich protein |
Signal, regulatory functions, others |
| CHS |
At5g13930 |
M20308 |
R89978 |
187C23T7 |
Chalcone synthase |
Aromatic metabolism |
| CM1 |
At1g69370 |
Z26519 |
T46455 |
145F17T7 |
Chorismate mutase |
Aromatic metabolism |
| COMT |
At5g54160 |
U70424 |
T88287 |
160E22T7 |
O-methyl transferase |
Aromatic metabolism |
| COR6,6 |
At5g15970 |
X55053 |
T21841 |
103L16T7 |
Cold-regulated gene |
Abiotic stress |
| CYP71B6 |
At2g24180 |
D78604 |
N65349 |
226P8T7 |
Cytochrome P450 |
Signal, regulatory functions, others |
| CYP79B2 |
At4g39950 |
T42902 |
AL035708 |
114O16T7 |
Cytochrome P450 |
Defense compounds |
| CYP83B1 |
At4g31500 |
D78598 |
T88645 |
160M24T7 |
Cytochrome P450 |
Signal, regulatory functions, others |
| CYP93A1 |
At3g20130 |
AP000383 |
T88278 |
160C9T7 |
Cytochrome P450 |
Signal, regulatory functions, others |
| DBP |
At2g45820 |
M25268 |
T76318 |
144O8T7 |
OGA binding protein |
Signal, regulatory functions, others |
| DHS1 |
At1g22410 |
M74819 |
W43049 |
200H2T7 |
DAHP synthase |
Aromatic metabolism |
| DREB2A |
At5g05410 |
AB007790 |
H77041 |
202K22T7 |
Transcription factor |
Abiotic stress |
| ECS1 |
At1g31580 |
X72022 |
R65161 |
173E15T7 |
Cell wall-associated protein |
Pathogenesis-related proteins |
| EF-1 |
At5g60390 |
X16432 |
R29806 |
161F17T7 |
Translation elongation factor |
Control |
| EF1a |
At1g07940 |
X16431 |
T43902 |
118P14T7 |
Elongation factor |
Control |
| EH |
At2g26740 |
D16628 |
T20885 |
96B7T7 |
Epoxide hydrolase |
Fatty acid signalling and metabolism |
| EIF4A |
At3g13920 |
X65052 |
NA |
NA |
Translation initiation factor |
Control |
| ELI3 |
At4g37980 |
X67816 |
R65519 |
171J24T7 |
Aromatic alcohol:NADP+ oxidoreductase |
Aromatic metabolism |
| ELI5 |
At4g28680 |
AJ011048 |
H76002 |
193C4T7 |
Tyrosine decarboxylase |
Aromatic metabolism |
| ELI9 |
At2g43150 |
AC004450 |
T41880 |
109G11T7 |
Hydroxyproline-rich glycoprotein |
Pathogenesis-related proteins |
| ER5 |
At1g01470 |
Y10085 |
Z37258 |
ATTS4001 |
LEA-like protein |
Abiotic stress |
| ERD1 |
At5g51070 |
D17582 |
AA042619 |
E7E10T7 |
ClpA/B protease |
Abiotic stress |
| ERD16 |
At3g52590 |
J05507 |
AA042250 |
E5A10T7 |
Ubiquitin extension protein |
Abiotic stress |
| ERD6 |
At1g08930 |
D89051 |
N37585 |
206M14T7 |
Sugar transporter |
Abiotic stress |
| EREC |
At2g26330 |
U47029 |
W43687 |
H3H11T7 |
Erecta receptor kinase |
Signal, regulatory functions, others |
| ERF |
At2g37790 |
AB003040 |
AA597715 |
215C1T7 |
Ethylene responding factor |
Signal, regulatory functions, others |
| ERF4 |
At3g15210 |
AB008106 |
N65389 |
227N9T7 |
Ethylene responding factor |
Signal, regulatory functions, others |
| F5H |
At4g36220 |
U38416 |
AA598015 |
249K6T7 |
Ferulate-5-hydroxylase |
Aromatic metabolism |
| FAD2 |
At3g12120 |
L26296 |
T46832 |
145C2T7 |
Fatty acid desaturase |
Fatty acid signalling and metabolism |
| FAD2bis |
At3g12120 |
L26296 |
H36908 |
180K15T7 |
Fatty acid desaturase |
Fatty acid signalling and metabolism |
| FAD3 |
At2g29980 |
L22931 |
N95959 |
F3F7T7 |
Fatty acid desaturase |
Fatty acid signalling and metabolism |
| FAD7 |
At3g11170 |
D14007 |
T04476 |
36C4T7 |
Fatty acid desaturase |
Fatty acid signalling and metabolism |
| FPS1 |
At5g47770 |
X75789 |
N96367 |
F1A1T7 |
Farnesyl pyrophosphate synthase |
Control |
| GAD2 |
At1g65960 |
U46665 |
T42013 |
110B14T7 |
Glutamate decarboxylase |
Signal, regulatory functions, others |
| GER2 |
At5g39190 |
X91957 |
Z17674 |
ATTS0248 |
Germin |
Oxidative stress |
| GF14 |
At5g16050 |
U60445 |
N38176 |
220G10T7 |
14-3-3 like protein |
Signal, regulatory functions, others |
| GPX1 |
At2g25080 |
AJ000469 |
T43669 |
121P8T7 |
Glutathione peroxidase |
Oxidative stress |
| GPX2 |
At2g31570 |
AJ000470 |
R90157 |
190H7T7 |
Glutathione peroxidase |
Oxidative stress |
| GRP |
At2g05580 |
AC006220 |
Z17599 |
ATTS0173 |
Glycine-rich protein |
Pathogenesis-related proteins |
| GS |
At3g17820 |
S69727 |
T14039 |
45G12T7 |
Glutamine synthetase (cytosol) |
Signal, regulatory functions, others |
| GSH1 |
At4g23100 |
Z29490 |
T43835 |
117O8T7 |
Glutamate-cysteine ligase |
Oxidative stress |
| GST1 |
At1g02930 |
Z26426 |
Z26426 |
ATTS1553 |
Glutathione S-transferase |
Oxidative stress |
| GST1bis |
At1g02930 |
Y14251 |
T45939 |
134B20T7 |
Glutathione S-transferase |
Oxidative stress |
| GST5 |
At2g29450 |
D44465 |
Z29042 |
ATTS2055 |
Glutathione S-transferase |
Oxidative stress |
| GST8 |
At1g78380 |
AJ012571 |
H77062 |
202N7T7 |
Similar to GST |
Oxidative stress |
| HADH |
At3g15290 |
AP000413 |
T76048 |
140I1T7 |
Hydroxyacyl dehydrogenase homolog |
Fatty acid signalling and metabolism |
| HCNL1 |
At5g23210 |
Z97337 |
H36420 |
172C23T7 |
Hydroxynitrile lyase |
Defense compounds |
| HCNL2 |
At4g16690 |
Z97341 |
Z25670 |
ATTS1135 |
Hydroxynitrile lyase |
Defense compounds |
| HEL |
At3g04720 |
U01880 |
N97174 |
245P5T7 |
Hevein-like protein |
Pathogenesis-related proteins |
| HIN1 |
At2g35980 |
AC007017 |
T88193 |
157G23T7 |
Harpin-induced gene |
Signal, regulatory functions, others |
| HIST |
At5g59690 |
M17132 |
Z17922 |
ATTS0406 |
Histone H4 |
Control |
| HMG1 |
At1g76490 |
J04537 |
H37162 |
185D15T7 |
HMG coA reductase |
Control |
| HPL |
At4g15440 |
AF087932 |
T20864 |
94J16T7 |
Hydroperoxide lyase |
Fatty acid signalling and metabolism |
| HRGP |
At2g14890 |
AC005396 |
R64825 |
167J15T7 |
Hydroxyproline-rich protein |
Pathogenesis-related proteins |
| HSC70-1 (HSP70-1) |
At5g02500 |
X74604 |
H36843 |
179N23T7 |
Heat-shock protein |
Abiotic stress |
| HSC70-1bis (HSP70-1) |
At5g02500 |
X74604 |
AA042628 |
E7F11T7 |
Heat shock protein |
Abiotic stress |
| JIP |
At3g16420 |
AC001645 |
N37581 |
206L22T7 |
Jasmonate-inducible protein |
Signal, regulatory functions, others |
| JR3 |
At1g51760 |
Y13577 |
N37950 |
214A5T7 |
Aminohydrolase |
Signal, regulatory functions, others |
| KNAT1 |
At4g08150 |
U14174 |
N96067 |
G1B1T7 |
Knotted1 homologue |
Signal, regulatory functions, others |
| LECRK |
At3g59700 |
AF001168 |
T13959 |
44C12T7 |
Lectin receptor kinase |
Signal, regulatory functions, others |
| LOX1 |
At1g55020 |
L04637 |
W43645 |
H3C1T7 |
Lipoxygenase |
Fatty acid signalling and metabolism |
| LOX2 |
At3g45140 |
L23968 |
T22547 |
106C8T7 |
Lipoxygenase |
Fatty acid signalling and metabolism |
| LOX3 |
At1g17420 |
AJ249794 |
NA |
NA |
Lipoxygenase |
Fatty acid signalling and metabolism |
| LOX4 |
At1g72520 |
AC016529 |
NA |
NA |
Lipoxygenase |
Fatty acid signalling and metabolism |
| LTI78 (RD29A) |
At5g52310 |
X67671 |
T44623 |
128A10T7 |
Cold-regulated gene |
Abiotic stress |
| MBP |
At3g16460 |
AP000373 |
N38164 |
220E24T7 |
Myrosinase binding protein |
Defense compounds |
| MEKK1 |
At4g08500 |
D50468 |
T04696 |
23A12T7 |
MAP kinase |
Signal, regulatory functions, others |
| MEKKK |
At1g79640 |
NA |
NA |
NA |
MAP-kinase-kinase-kinase homolog |
Signal, regulatory functions, others |
| MFP2 |
At3g06860 |
AF123254 |
T45936 |
134A15T7 |
Multifuctional protein (beta-oxidation) |
Fatty acid signalling and metabolism |
| MP2C |
At3g56860 |
Y11607* |
T20404 |
78G4T7 |
Phosphatase |
Signal, regulatory functions, others |
| MPK3 |
At3g45640 |
D21839 |
T45144 |
77D1T7 |
MAP kinase |
Signal, regulatory functions, others |
| MRP2 |
At2g34660 |
AF020288 |
R30068 |
164N3T7 |
Glutathione-conjugate transporter |
Abiotic stress |
| MT1 |
At1g07600 |
L15389 |
R65397 |
170L1T7 |
Metallothionein |
Pathogenesis-related proteins |
| MYB59 |
At5g59780 |
AF062894 |
N37592 |
206N11T7 |
Transcription factor |
Signal, regulatory functions, others |
| MYB68 |
At5g65790 |
AF062901 |
T42065 |
110F12T7 |
Transcription factor |
Signal, regulatory functions, others |
| MYOL |
At5g41140 |
AB010072 |
NA |
NA |
Remorin interactor (myosin-like) |
Signal, regulatory functions, others |
| NDK |
At4g09320 |
X69378 |
Z26454 |
ATTS1583 |
Nucleoside diphosphate kinase |
Signal, regulatory functions, others |
| NDR1 |
At3g20600 |
AF021346 |
T21313 |
95G3T7 |
Unknown |
Signal, regulatory functions, others |
| NIT2 |
At3g44320 |
U09958 |
H76590 |
198M23T7 |
Nitrilase |
Signal, regulatory functions, others |
| NPR1 |
At1g64280 |
U87794 |
T22612 |
99O5T7 |
Transcription factor inhibitor |
Signal, regulatory functions, others |
| NR |
At1g37130 |
J03240 |
T88297 |
160F3T7 |
Nitrate reductase |
Signal, regulatory functions, others |
| OEC |
At3g50820 |
X52428 |
AA042401 |
H8G6T7 |
Oxygen evolving complex |
Control |
| OPR1 |
At1g76680 |
Y10617 |
T04750 |
31G6T7 |
OPDA reductase |
Fatty acid signalling and metabolism |
| OPR3 |
At2g06050 |
AF132212 |
AV558591 |
SQ102e04F |
OPDA reductase |
Fatty acid signalling and metabolism |
| OZI1 |
At4g00860 |
U20347 |
T04138 |
20C9T7 |
Unknown |
Oxidative stress |
| PAL |
At2g37040 |
L33677 |
Pal10-3 |
CD3-19 |
Phenylalanine ammonia lyase |
Aromatic metabolism |
| PAL1 |
At2g37040 |
L33677 |
Pal1(1-6) |
CD3-121 |
Phenylalanine ammonia lyase |
Aromatic metabolism |
| PAL2 |
At3g53260 |
L33678 |
Pal2(2-2) |
CD3-122 |
Phenylalanine ammonia lyase |
Aromatic metabolism |
| PAL3 |
At5g04230 |
L33679 |
Pal3(3-3) |
CD3-123 |
Phenylalanine ammonia lyase |
Aromatic metabolism |
| PDF1.2 |
At5g44420 |
T04323 |
T04323 |
37F10T7 |
Defensin |
Pathogenesis-related proteins |
| PED1 (KAT2) |
At2g33150 |
AB008854 |
T20943 |
91A18T7 |
Thiolase |
Fatty acid signalling and metabolism |
| PEL |
At3g07010 |
AC008113 |
N65314 |
226D20T7 |
Pectate lyase |
Pathogenesis-related proteins |
| PGIP |
At5g06860 |
AB010697 |
T45680 |
179F6T7 |
Polygalacturonase-inhibiting protein |
Pathogenesis-related proteins |
| PGK |
At3g12780 |
U37701 |
T44490 |
125L3T7 |
Phosphoglycerate kinase |
Control |
| PIN2 |
At2g02100 |
X69139 |
N37912 |
213G20T7 |
Proteinase inhibitor II |
Pathogenesis-related proteins |
| PIOX |
At3g01420 |
AC010870 |
N38086 |
218B16T7 |
Alpha-dioxygenase |
Fatty acid signalling and metabolism |
| PIR7B |
At2g23600 |
AC003040 |
N37344 |
210E1T7 |
Esterase |
Pathogenesis-related proteins |
| PLASTO |
At1g76100 |
M20937 |
AA712301 |
187G11T7 |
Plastocyanin |
Control |
| PLC1 |
At4g38530 |
U13203 |
AA720033 |
135N17T7 |
Phospholipase C |
Fatty acid signalling and metabolism |
| PLC2 |
At3g47290 |
X85973 |
AA650803 |
284C11T7 |
Phospholipase C |
Fatty acid signalling and metabolism |
| PLD |
At3g15730 |
U36381 |
R65400 |
170L24T7 |
Phospholipase D |
Fatty acid signalling and metabolism |
| PME1 |
At1g53840 |
X81585 |
N96870 |
G6C7T7 |
Pectin methyl esterase |
Pathogenesis-related proteins |
| PR1 |
At2g14610 |
M90508 |
NA |
NA |
Antifungal protein |
Pathogenesis-related proteins |
| PR2 |
At3g57260 |
M90509 |
NA |
NA |
Glucanase |
Pathogenesis-related proteins |
| PR3AIII |
At5g24090 |
M34107 |
T46824 |
145B23T7 |
Chitinase |
Pathogenesis-related proteins |
| PR3AIV |
At3g54420 |
Y14590 |
R83947 |
64H5T7 |
Chitinase |
Pathogenesis-related proteins |
| PR3B1 |
At3g12500 |
M38240 |
AA067518 |
92G1T7 |
Chitinase |
Pathogenesis-related proteins |
| PR5 |
At1g75040 |
M90510 |
NA |
NA |
Thaumatin-like protein |
Pathogenesis-related proteins |
| PRK |
At1g32060 |
X58149 |
H37468 |
130P11T7 |
Phosphoribulokinase |
Control |
| PRODH |
At3g30775 |
U59508 |
T43041 |
115P1T7 |
Proline dehydrogenase |
Abiotic stress |
| PRX7 |
At5g42180 |
X98316 |
T43249 |
119F5T7 |
Peroxidase |
Oxidative stress |
| RAB18 |
At5g66400 |
X68042 |
W43068 |
246K10T7 |
Small GTP-binding protein |
Abiotic stress |
| RAB1C |
At5g47200 |
NM_124091 |
NA |
NA |
Small GTP-binding protein |
Signal, regulatory functions, others |
| RD19 |
At4g39090 |
D13042 |
T41787 |
68A4T7 |
Cysteine-protease |
Abiotic stress |
| RD19bis |
At4g39090 |
D13042 |
N96916 |
245C12T7 |
Cysteine-protease |
Abiotic stress |
| RD28 |
At2g37180 |
D13254 |
N38328 |
222N5T7 |
Aquaporin |
Abiotic stress |
| REM2 |
At3g61260 |
AL137898 |
T46804 |
143K9T7 |
OGA binding protein homolog |
Signal, regulatory functions, others |
| REM3 |
At2g41870 |
U90439 |
R90622 |
190K17T7 |
OGA binding protein homolog |
Signal, regulatory functions, others |
| REM5 |
At1g67590 |
AC011020 |
Z25732 |
ATTS1209 |
OGA binding protein homolog |
Signal, regulatory functions, others |
| RNS1 |
At2g02990 |
U05206 |
Z27289 |
ATTS1981 |
RNase |
Abiotic stress |
| RNS2 |
At2g39780 |
M98336 |
R90379 |
185O18T7 |
RNase |
Signal, regulatory functions, others |
| ROF1 |
At3g25230 |
U49453 |
T76661 |
149C21T7 |
Rotamase homolog |
Signal, regulatory functions, others |
| RPS11 |
At3g48930 |
J05216 |
NA |
NA |
Ribosomal protein S11 |
Control |
| RUB |
At5g38420 |
X14564 |
H77193 |
205A7T7 |
Rubisco small subunit |
Control |
| SAHH |
At4g13940 |
AF059581 |
H36259 |
176O11T7 |
S-adenosyl-L-homocysteine hydrolase |
Signal, regulatory functions, others |
| SAM |
At4g01850 |
M33217 |
H36699 |
177J14T7 |
S-adenosylmethionine synthetase |
Signal, regulatory functions, others |
| SODCU |
At1g08830 |
X60935 |
W43166 |
247O9T7 |
Superoxide dismutase |
Oxidative stress |
| SODFE |
At4g25100 |
M55910 |
R30132 |
166F23T7 |
Superoxide dismutase |
Oxidative stress |
| SPS |
At5g20280 |
Z56278* |
H36086 |
173J24T7 |
Sucrose phosphate synthase |
Signal, regulatory functions, others |
| TCH1 |
At2g41110 |
D45848 |
H77078 |
203B18T7 |
Calmodulin |
Abiotic stress |
| TCH2 |
At5g37770 |
AF026473 |
AA067525 |
92I17T7 |
Calmodulin related |
Abiotic stress |
| TCH3 |
At2g41100 |
L34546 |
N38224 |
221D18T7 |
Calmodulin related |
Abiotic stress |
| TCH4 |
At5g57560 |
U27609 |
T76325 |
146L14T7 |
Endo-transglycosylase |
Abiotic stress |
| TGG1 |
At5g26000 |
X79194 |
T21685 |
96I7T7 |
Myrosinase |
Defense compounds |
| TGG2 |
At5g25980 |
X79195 |
T44974 |
127M23T7 |
Myrosinase |
Defense compounds |
| THI2.1 |
At1g72260 |
L41244 |
F15324 |
ATTS5572 |
Thionin |
Pathogenesis-related proteins |
| TSA |
At3g54640 |
U18993 |
T21998 |
104O12T7 |
Tryptophan synthase alpha ss |
Tryptophan pathway |
| TSB |
At5g54810 |
M23872 |
W43135 |
247J14T7 |
Tryptophan synthase beta ss |
Tryptophan pathway |
| TUFA |
At4g20360 |
X52256 |
N37155 |
205P2T7 |
Elongation factor Tu |
Control |
| UBIQ |
At5g03240 |
X12853 |
T21852 |
103M18T7 |
Polyubiquitin UBQ4 |
Control |
| VSP |
At5g24770 |
AB006778 |
NA |
NA |
Vegetative storage protein |
Pathogenesis-related proteins |
| XERO2 |
At3g50970 |
U19536 |
Z18121 |
ATTS0613 |
Unknown |
Abiotic stress |
For genes where no expressed sequence tag (EST) was
available, gene-specific fragments were amplifed from cDNA
clones or from genomic DNA.
* Not Arabidopsis. NA, not available
|
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