Publications

Publications | Masters and Phd thesis

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Publications

In Press | 2020 | 2019 | ...

In Press

Mass spectrometry based immunopeptidomics leads to robust predictions of phosphorylated HLA class I ligands.

Solleder M., Guillaume P., Racle J., Michaux J., Pak H.S., Müller M., Coukos G., Bassani-Sternberg M., Gfeller D. Molecular & cellular proteomics. Peer-reviewed.

[DOI][Pmid][serval:BIB_0EBACC6764B1]

2020

Spatially and temporally defined lysosomal leakage facilitates mitotic chromosome segregation.

Hämälistö S., Stahl J.L., Favaro E., Yang Q., Liu B., Christoffersen L., Loos B., Guasch Boldú C., Joyce J.A., Reinheckel T. et al., 2020/01/13. Nature communications, 11 (1) p. 229. Peer-reviewed.

[DOI][Pmid][serval:BIB_61F53FCBFD55]

2019

Gender medicine and oncology: report and consensus of an ESMO workshop.

Wagner A.D., Oertelt-Prigione S., Adjei A., Buclin T., Cristina V., Csajka C., Coukos G., Dafni U., Dotto G.P., Ducreux M. et al., 2019/12/01. Annals of oncology, 30 (12) pp. 1914-1924. Peer-reviewed.

[DOI][Pmid][serval:BIB_C7C76EA90383]

Diagnostic Nodes of Patient Selection for Cytoreductive Surgery and Hyperthermic Intraperitoneal Chemotherapy Among Colorectal Cancer Patients: A Swiss National Multicenter Survey.

Steffen T., Putora P.M., Hübner M., Gloor B., Lehmann K., Kettelhack C., Adamina M., Peterli R., Schmidt J., Ris F. et al., 2019/12. Clinical colorectal cancer, 18 (4) pp. e335-e342. Peer-reviewed.

[DOI][WoS][Pmid][serval:BIB_A52BDCE5AABD]

Systemic and central nervous system metabolic alterations in Alzheimer’s disease

van der Velpen Vera, Teav Tony, Gallart-Ayala Hector, Mehl Florence, Konz Ioana, Clark Christopher, Oikonomidi Aikaterini, Peyratout Gwendoline, Henry Hugues, Delorenzi Mauro et al., 2019/12. Alzheimer's Research & Therapy. Peer-reviewed.

[DOI][serval:BIB_901648E242CF]

Systemic and central nervous system metabolic alterations in Alzheimer’s disease

[DOI][serval:BIB_43241841F79E]

Murine CD8 T Cell Functional Avidity is Stable In Vivo but not In Vitro: Independence from Homologous Prime/Boost Time Interval and Antigen Density.

Gilfillan C.B., Wang C., Mohsen M.O., Rufer N., Hebeisen M., Allard M., Verdeil G., Irvine D.J., Bachmann M.F., Speiser D.E., 2019/11/30. European Journal of Immunology, 161 pp. 594-10. Peer-reviewed.

[DOI][Pmid][serval:BIB_5686BF1354AC]

Evaluating Magnetic Resonance Spectroscopy as a Tool for Monitoring Therapeutic Response of Whole Brain Radiotherapy in a Mouse Model for Breast-to-Brain Metastasis.

Chae W.H., Niesel K., Schulz M., Klemm F., Joyce J.A., Prümmer M., Brill B., Bergs J., Rödel F., Pilatus U. et al., 2019/11/27. Frontiers in oncology, 9 p. 1324. Peer-reviewed.

[DOI][WoS][Pmid][serval:BIB_22B16FC3657F]

CD56 as a marker of an ILC1-like population with NK cell properties that is functionally impaired in AML.

Salomé B., Gomez-Cadena A., Loyon R., Suffiotti M., Salvestrini V., Wyss T., Vanoni G., Ruan D.F., Rossi M., Tozzo A. et al., 2019/11/26. Blood advances, 3 (22) pp. 3674-3687. Peer-reviewed.

[URN][DOI][WoS][Pmid][serval:BIB_4BC26C680B22]

Towards Quantification of Inflammation in Atherosclerotic Plaque in the Clinic - Characterization and Optimization of Fluorine-19 MRI in Mice at 3 T.

Darçot E., Colotti R., Pellegrin M., Wilson A., Siegert S., Bouzourene K., Yerly J., Mazzolai L., Stuber M., van Heeswijk R.B., 2019/11/25. Scientific reports, 9 (1) p. 17488. Peer-reviewed.

[DOI][WoS][Pmid][serval:BIB_40394E9CBB35]

Strong Enrichment of Aromatic and Sulfur-Containing Residues in Ligand-Protein Binding Sites.

El Hage K., Zoete V., 2019/11/25. Journal of chemical information and modeling, 59 (11) pp. 4921-4928. Peer-reviewed.

[DOI][WoS][Pmid][serval:BIB_8964B650737F]

Targeting STAT3 and STAT5 in Tumor-Associated Immune Cells to Improve Immunotherapy.

Verdeil G., Lawrence T., Schmitt-Verhulst A.M., Auphan-Anezin N., 2019/11/21. Cancers, 11 (12). Peer-reviewed.

[DOI][Pmid][serval:BIB_34CE8413C2A8]

Immunopeptidomics of colorectal cancer organoids reveals a sparse HLA class I neoantigen landscape and no increase in neoantigens with interferon or MEK-inhibitor treatment.

Newey A., Griffiths B., Michaux J., Pak H.S., Stevenson B.J., Woolston A., Semiannikova M., Spain G., Barber L.J., Matthews N. et al., 2019/11/18. Journal for immunotherapy of cancer, 7 (1) p. 309. Peer-reviewed.

[DOI][WoS][Pmid][serval:BIB_7418AE3DFDA7]

Robust prediction of HLA class II epitopes by deep motif deconvolution of immunopeptidomes.

Racle J., Michaux J., Rockinger G.A., Arnaud M., Bobisse S., Chong C., Guillaume P., Coukos G., Harari A., Jandus C. et al., 2019/11. Nature biotechnology, 37 (11) pp. 1283-1286. Peer-reviewed.

[DOI][WoS][Pmid][serval:BIB_D9A8D08A5BC6]

Intratumoral CD8<sup>+</sup> T cells with stem cell-like properties: Implications for cancer immunotherapy.

Held W., Siddiqui I., Schaeuble K., Speiser D.E., 2019/10/23. Science translational medicine, 11 (515). Peer-reviewed.

[DOI][Pmid][serval:BIB_2890415E8A72]

The Romand Network of Oncology: bridging the gap of personalised oncology

MICHIELIN O., TSANTOULIS P., HOMICSKO K., CHRISTINAT Y., DE LEVAL L., BISIG B., MISSIAGLIA E., ZOETE V., KREBS F., FORTIN A. et al., 2019/10/18. Swiss Medical Weekly.

[serval:BIB_2A3947B3BCE2]

CDK4 Regulates Lysosomal Function and mTORC1 Activation to Promote Cancer Cell Survival

Martínez-Carreres Laia, Puyal Julien, Leal-Esteban Lucía C., Orpinell Meritxell, Castillo-Armengol Judit, Giralt Albert, Dergai Oleksandr, Moret Catherine, Barquissau Valentin, Nasrallah Anita et al., 2019/10/15. Cancer Research, 79 (20) pp. 5245-5259.

[DOI][WoS][Pmid][serval:BIB_A55F9416C381]

Adenosine mediates functional and metabolic suppression of peripheral and tumor-infiltrating CD8<sup>+</sup> T cells.

Mastelic-Gavillet B., Navarro Rodrigo B., Décombaz L., Wang H., Ercolano G., Ahmed R., Lozano L.E., Ianaro A., Derré L., Valerio M. et al., 2019/10/10. Journal for immunotherapy of cancer, 7 (1) p. 257. Peer-reviewed.

[DOI][WoS][Pmid][serval:BIB_CC3C085DEA43]

Inhibition Mechanisms of Indoleamine 2,3-Dioxygenase 1 (IDO1).

Röhrig U.F., Reynaud A., Majjigapu S.R., Vogel P., Pojer F., Zoete V., 2019/10/10. Journal of medicinal chemistry, 62 (19) pp. 8784-8795. Peer-reviewed.

[DOI][Pmid][serval:BIB_D8CCFFB94292]

Disrupting Myelin-Specific Th17 Cell Gut Homing Confers Protection in an Adoptive Transfer Experimental Autoimmune Encephalomyelitis.

Duc D., Vigne S., Bernier-Latmani J., Yersin Y., Ruiz F., Gaïa N., Leo S., Lazarevic V., Schrenzel J., Petrova T.V. et al., 2019/10/08. Cell reports, 29 (2) pp. 378-390.e4. Peer-reviewed.

[DOI][WoS][Pmid][serval:BIB_6227A92C8D06]

Masters thesis

Publications (1)

CANCER IMMUNOTHERAPY WITH VEGFR-3 TARGETED CAR T-CELLS

KIRITSIS K., 2016. 32, Université de Lausanne, Faculté de biologie et médecine, COUKOS G. (dir.).

[URN][serval:BIB_AD0E970E95CE]

Phd thesis

Publications (6)

Molecular and functional immune determinants associated with the optimal immunogenicity of Yellow Fever vaccination in humans

Bovay Amandine Xuan Kim, 2019/06/07., Université de Lausanne, Faculté de biologie et médecine, Speiser Daniel (dir.).

[URN][serval:BIB_5EBE536D2CB3]

Cytolytic CD4 T cells: Analysis of a novel T cell candidate for human tumor immunotherapy

Cachot Amélie, 2019., Université de Lausanne, Faculté de biologie et médecine, Romero Pedro (dir.).

[serval:BIB_F0A6BE95CE46]

Identification and Isolation of Highly Functional Tumor-Specific CD8 T Cenis for Adoptive Cell Transfer Therapy

MAGNIN Morgane, 2019., Université de Lausanne, Faculté de biologie et médecine, HARARI Alexandre (dir.).

[URN][serval:BIB_E25A9568380B]

Molecular determinants governing CD8+ T cell mediated anti-tumor immunity

Martinez-Usatorre Amaia, 2018/04/27. 117, Université de Lausanne, Faculté de biologie et médecine, Romero Pedro (dir.).

[URN][serval:BIB_08CEE3B79D75]

Harnessing iNKT and CD8 T cells for Immunotherapy of Cancer

Tschumi Benjamin Olivier, 2018/03/13. 117, Université de Lausanne, Faculté de biologie et médecine, Romero Pedro (dir.).

[URN][serval:BIB_786BC3B46C6D]

Characterization of local and systemic immune-modulation in melanoma patients

Bordy N., 2015. 204, Université de Lausanne, Faculté de biologie et médecine, Speiser D., Swartz M. (dir.).

[URN][serval:BIB_9F9512EEBA1F]