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Faculty of Geosciences and Environment

Institute of Earth Surface Dynamics

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Guisan Antoine

Publications

Publications | Masters and Phd thesis

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Publications

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In Press | 2023 | 2022 | ...

In Press

Uncovering broad macroecological patterns by comparing the shape of species' distributions along environmental gradients

Bramon Mora B., Guisan A., Alexander J.M. American Naturalist. Peer-reviewed.

[serval:BIB_3D0B0A4B4098]

Global distribution modelling of a conspicuous Gondwanian soil protist reveals latitudinal dispersal limitation and range contraction in response to climate warming

Bruni E.P., Rusconi O., Broennimann O., Adde A., Jauslin R., Krashevska V., Kosakyan A., Armynot du Chatelet E., Alcino J.P., Beyens L. et al. Diversity and Distributions. Peer-reviewed.

[serval:BIB_387EC9305054]

Potential sources of time lags in calibrating species distribution models

Essl F., García-Rodríguez A., Lenzner B., Alexander J.M., Capinha C., Gaüzère P., Guisan A., Kühn I., Lenoir J., Richardson D.M. et al. Journal of Biogeography. Peer-reviewed.

[serval:BIB_728FF0BF2A58]

preview resource BIB_7215CEA1DC2E.P001

Transmission mode and dispersal traits correlate with host specificity in mammalian gut microbes.

Mazel F., Guisan A., Parfrey L.W. Molecular ecology. Peer-reviewed.

[URN][DOI][WoS][Pmid][serval:BIB_7215CEA1DC2E]

Modelling invasion by wattles: challenges and applications

Vicente J.R., Pinto E., Guisan A., Kueffer C., Marchante E., Kühn I., Cabral J.A., Gonçalves J., Honrado J.P., Alonso J. et al. dans Acacia Invasions, Richardson, D..

[serval:BIB_7C7B8B67CD6F]

2023

Sensitivity of habitat network models to changes in maximum dispersal distance

Ortiz-Rodríguez Damian O., Guisan Antoine, Van Strien Maarten J., 2023/11/06. PLOS ONE, 18 (11) pp. e0293966. Peer-reviewed.

[DOI][Pmid][serval:BIB_787A7130892C]

Into the microbial niche.

Malard L.A., Guisan A., 2023/10. Trends in ecology & evolution, 38 (10) pp. 936-945. Peer-reviewed.

[DOI][Pmid][serval:BIB_973296C056F3]

preview resource BIB_ACB065947713.P001

Ecological and biological indicators of the accuracy of species distribution models: lessons from European bryophytes

Collart Flavien, Broennimann Olivier, Guisan Antoine, Vanderpoorten Alain, 2023/08. Ecography, 2023 (8). Peer-reviewed.

[URN][DOI][WoS][serval:BIB_ACB065947713]

preview resource BIB_EE1B0075B0C8.P001

Catchment-based sampling of river eDNA integrates terrestrial and aquatic biodiversity of alpine landscapes.

Reji Chacko M., Altermatt F., Fopp F., Guisan A., Keggin T., Lyet A., Rey P.L., Richards E., Valentini A., Waldock C. et al., 2023/08. Oecologia, 202 (4) pp. 699-713. Peer-reviewed.

[URN][DOI][WoS][Pmid][serval:BIB_EE1B0075B0C8]

preview resource BIB_EEBF986F958A.P001

Snow cover persistence as a useful predictor of alpine plant distributions

Panchard Thomas, Broennimann Olivier, Gravey Mathieu, Mariethoz Grégoire, Guisan Antoine, 2023/07/18. Journal of Biogeography. Peer-reviewed.

[URN][DOI][WoS][serval:BIB_EEBF986F958A]

Small to train, small to test: Dealing with low sample size in model evaluation

Collart Flavien, Guisan Antoine, 2023/07. Ecological Informatics, 75 p. 102106. Peer-reviewed.

[URN][DOI][WoS][serval:BIB_DDA1566B06B4]

Taxonomic and functional biogeographies of soil bacterial communities across the Tibet plateau are better explained by abiotic conditions than distance and plant community composition.

Liang Q., Mod H.K., Luo S., Ma B., Yang K., Chen B., Qi W., Zhao Z., Du G., Guisan A. et al., 2023/07. Molecular ecology, 32 (13) pp. 3747-3762. Peer-reviewed.

[DOI][WoS][Pmid][serval:BIB_F04794709DBF]

preview resource BIB_D460E98102CA.P001

Linking plant and vertebrate species to Nature's Contributions to People in the Swiss Alps.

Rey P.L., Vittoz P., Petitpierre B., Adde A., Guisan A., 2023/05/05. Scientific reports, 13 (1) p. 7312. Peer-reviewed.

[URN][DOI][WoS][Pmid][serval:BIB_D460E98102CA]

preview resource BIB_5AE6DE82915F.P001

Landscape structure is a key driver of soil protist diversity in meadows in the Swiss Alps

Seppey CVW, Lara ., Broennimann O., Guisan A., Malard L., Singer D., Yashiro E., Fournier B., 2023/04. Landscape Ecology, 38 (4) pp. 949-965. Peer-reviewed.

[URN][DOI][WoS][serval:BIB_5AE6DE82915F]

preview resource BIB_348FEC001714.P001

Developing species distribution models for critically endangered species using participatory data: The European sturgeon marine habitat suitability

Charbonnel Anaïs, Lambert Patrick, Lassalle Géraldine, Quinton Eric, Guisan Antoine, Mas Lise, Paquignon Guillaume, Lecomte Marie, Acolas Marie-Laure, 2023/01. Estuarine, Coastal and Shelf Science, 280 p. 108136. Peer-reviewed.

[URN][DOI][WoS][serval:BIB_348FEC001714]

preview resource BIB_79EC6A21B8EC.P001

N‐SDM: a high‐performance computing pipeline for Nested Species Distribution Modelling

Adde Antoine, Rey Pierre-Louis, Brun Philipp, Külling Nathan, Fopp Fabian, Altermatt Florian, Broennimann Olivier, Lehmann Anthony, Petitpierre Blaise, Zimmermann Niklaus E. et al., 2023. Ecography, 2023 (6) pp. e06540. Peer-reviewed.

[URN][DOI][serval:BIB_79EC6A21B8EC]

preview resource BIB_0C77A008BDD2.P001

Too many candidates: Embedded covariate selection procedure for species distribution modelling with the covsel R package

Adde Antoine, Rey Pierre-Louis, Fopp Fabian, Petitpierre Blaise, Schweiger Anna K., Broennimann Olivier, Lehmann Anthony, Zimmermann Niklaus E., Altermatt Florian, Pellissier Loïc et al., 2023. Ecological Informatics, 75 p. 102080. Peer-reviewed.

[URN][DOI][serval:BIB_0C77A008BDD2]

A tale of three vines: current and future threats to wild Eurasian grapevine by vineyards and invasive rootstocks

Petitpierre B., Arnold C., Phelps L.N., Guisan A., 2023. Diversity and Distributions, 29 (12) pp. 1594-1608. Peer-reviewed.

[DOI][serval:BIB_8E27F9BEDE7D]

Disentangling the roles of chance, abiotic factors and biotic interactions among epiphytic bryophyte communities in a tropical rainforest (Yunnan, China)

Shen T., Song L., Corlett R. T., Guisan A., Wang J., Ma W.-Z., Mouton L., Vanderpoorten A., Collart F., 2023. Plant Biology, 25 (6) pp. 880-891. Peer-reviewed.

[DOI][Pmid][serval:BIB_50EB35B512E1]

2022

preview resource BIB_D00062E0BD13.P001

What makes a good phorophyte? Predicting occupancy, species richness and abundance of vascular epiphytes in a lowland seasonal tropical forest

Shen Ting, Song Liang, Collart Flavien, Guisan Antoine, Su Yang, Hu Hai-Xia, Wu Yi, Dong Jin-Long, Vanderpoorten Alain, 2022/11/25. Frontiers in Forests and Global Change, 5. Peer-reviewed.

[URN][DOI][WoS][serval:BIB_D00062E0BD13]

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Phd thesis

Publications (20)

Ecology of the European pond turtle (Emys orbicularis,L.1758) in Switzerland

DUCOTTERD Charlotte, GUISAN Antoine, 2020., Université de Lausanne, Faculté de biologie et médecine, RUBIN Jean-François (dir.).

[serval:BIB_603CF6B63E95]

preview resource BIB_24435437EAAB.P001

Uncertainty, errors and virtual ecology: using artificial data to improve species distribution models

FERNANDES Rui, 2018., Université de Lausanne, Faculté de biologie et médecine, Guisan Antoine (dir.).

[URN][serval:BIB_24435437EAAB]

FUNGAL BIOGEOGRAPHY IN THE WESTERN SWISS ALPS: Linking high-throughput sequencing and spatial ecology to characterise the diversity, distribution patterns and environmental niche of soil fungi along environmental gradients

PINTO-FIGUEROA Eric Alejandro, 2017., Université de Lausanne, Faculté de biologie et médecine, Guisan Antoine (dir.).

[serval:BIB_7D11EC9E2088]

MODELS, NICHES AND TRAITS: TOWARDS IMPROVED RED LIST ASSESSMENTS

BREINER F. T., 2016., Université de Lausanne, Faculté de biologie et médecine, Guisan A. (dir.).

[serval:BIB_3B8F4FBE73F9]

Assessing the use of very high resolution data to predict species distribution in a mountain environment

Pradervand J.-N., 2015. 66, Université de Lausanne, Faculté de biologie et médecine, Guisan A. (dir.).

[serval:BIB_CF240C041173]

Predicting spatial patterns of plant biodiversity : from species to communities

Dubuis A., 2013., Université de Lausanne, Faculté de biologie et médecine, Guisan A. (dir.).

[serval:BIB_3E4F8827C7E4]

Using environmental niche modeling to understand biological invasions in a changing world

Petitpierre B., 2013. 317, Université de Lausanne, Faculté de biologie et médecine, Guisan A. (dir.).

[serval:BIB_4FFBC3422008]

Predicting the past, present and future of plant biodiversity in Chile : a habitat suitability modeling approach

Pliscoff P., 2013. 252, Université de Lausanne, Faculté de biologie et médecine, Guisan A. (dir.).

[serval:BIB_2B54A153F03D]

Species distributions and interactions in a changing world : from understanding to forecasting

Pellissier L., 2012., Université de Lausanne, Faculté de biologie et médecine, Guisan A., Cherix D. (dir.).

[serval:BIB_4C07AD965FA7]

Modelling landscape invasion by alien plants under current and future conditions of climate and land use

Vicente J.R., 2012. PhD thesis, University of Porto & CIBIO, Honrado J. (dir.).

[serval:BIB_A6E061F35E8E]

Species distribution models for conservation-oriented studies in Switzerland : filling data and tools gaps

Maggini R., 2011. 235, Université de Lausanne, Faculté de biologie et médecine, Guisan A. (dir.).

[serval:BIB_16EF29C539B2]

Evolutionary history and its relevance in understanding and conserving southern African biodiversity

Pio D., 2010. 148, Université de Lausanne, Faculté de biologie et médecine, Guisan A. (dir.).

[serval:BIB_5EC20D60D0BD]

Unfolding nature "in silico" : overcoming practical and metodological limitations of species distribution models

Engler R., 2009. 239, Université de Lausanne, Faculté de biologie et médecine, Guisan A. (dir.).

[serval:BIB_81BD19FC42D6]

Niche, distribution and global change : modeling insights into biogeography and conservation biology Olivier Broennimann

Broennimann O., 2008. 245, Université de Lausanne, Faculté de biologie et médecine, Guisan A. (dir.).

[serval:BIB_B84ED04CB215]

Treeline and climate change : analyzing and modeling patterns and shifts in the Swiss Alps

Gehrig-Fasel J.A., 2007. 132, Université de Lausanne, Faculté de biologie et médecine, Guisan A. (dir.).

[serval:BIB_242C1C19349E]

A discrete forest in a continuous landscape : investigating interactions between natural resource management and sustainable development

Mathys L., 2007. 90, Université de Lausanne, Faculté de biologie et médecine, Guisan A. (dir.).

[serval:BIB_3832C0AE4532]

Providing more informative projections of climate change impact on plant distribution in a mountain environment

Randin C., 2007. 252, Université de Lausanne, Faculté de biologie et médecine, Guisan A. (dir.).

[serval:BIB_DF88CE185D8F]

Multiscale assessment of plant diversity in wooded pastures of the Jura mountains

Dufour A., 2006. 111, Université de Lausanne, Faculté de biologie et médecine, Buttler A. (dir.).

[serval:BIB_D7490BA40CBF]

Changing landscapes of Switzerland: assessing effects of historic and future land uses and land covers on the occurrence of selected butterfly species

Lütolf M., 2006. 126, Université de Lausanne, Faculté de biologie et médecine, Guisan D. (dir.).

[serval:BIB_84239CF155BF]

Modelling tree population dynamics at the alpine and boreal tree-line ecotones in response to climate and land-use change

Rickebusch S., 2006. 126, Université de Lausanne, Faculté de biologie et médecine, Guisan A. (dir.).

[serval:BIB_A00D24B11D80]

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