Student contributions

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2018

In vitro characterization of PlyE146, a novel phage lysin that targets Gram-negative bacteria.

 

Larpin Y., Oechslin F., Moreillon P., Resch G., Entenza J.M. & Mancini S.

 

PLoS ONE 13(2): e0192507, 06 February 2018

 

 

Genomic changes underlying host specialization in the bee gut symbiont Lactobacillus Firm5.

 

Ellegaard K.M., Brochet S., Bonilla-Rosso G., Emery O., Glover N., Hadadi N., Jaron  K.S., , van der Meer J.R., Robinson-Rechavi M., Sentchilo V. , Tagini F. SAGE class 2016-17 & Engel P.

 

bioRxiv.org; doi https://doi.org/10.1101/483685

 

 

 

2017

Azole Resistance in Aspergillus fumigatus: A Consequence of Antifungal Use in Agriculture?

Berger S., El Chazli Y., and Babu A.F. & Coste A.T.

Front. Microbiol., 07 June 2017

 

Evolution and comparative ecology of parthenogenesis in haplodiploid arthropods.

van der Kooi C.J., Matthey‐Doret C. & Schwander T.

Evolution Letters 2017, 1 (6), 304–316

 

 

 

2016

HIV-1 latent reservoir: size matters.

Hodel F., Patxot M., Snäkä T. & Ciuffi A.

Future Virology, 2016 December; 11(12): 785-794

 

 

 

2015

Functional characterization of the Pneumocystis jirovecii potential drug targets dhfs and abz2 involved in folate biosynthesis.

Luraschi A., Cissé O.H., Monod M., Pagni M., Hauser P.M.

Antimicrob Agents Chemother. 2015 May;59(5):2560-6
 

Sequencing and characterizing the genome of Estrella lausannensis as an undergraduate project: training students and biological insights.

Bertelli C., Aeby S., Chassot B., Clulow J., Hilfiker O., Rappo S., Ritzmann S., Schumacher P., Terrettaz C., Benaglio P., Falquet L., Farinelli L., Gharib W.H., Goesmann A., Harshman K., Linke B., Miyazaki R., Rivolta C., Robinson-Rechavi M., van der Meer J.R., Greub G.

Front Microbiol. 2015, Feb 19;6:101

 

Comparative genome analysis of Pseudomonas knackmussii B13, the first bacterium known to degrade chloroaromatic compounds.


Miyazaki R., Bertelli C., Benaglio P., Canton J., De Coi N., Gharib W.H., Gjoksi B., Goesmann A., Greub G., Harshman K., Linke B., Mikulic J., Mueller L., Nicolas D., Robinson-Rechavi M., Rivolta C., Roggo C., Roy S., Sentchilo V., Siebenthal A.V., Falquet L., van der Meer J.R.

Environ Microbiol, 2015, 17(1):91-104
 

A role for homologous recombination proteins in cell cycle regulation.

Kostyrko K., Bosshard S., Urban Z., Mermod N.

Cell Cycle 2015; 14(17): 2853–2861

 
2014

Distinct levels in Pom1 gradients limit Cdr2 activity and localization to time and position division.

Bhatia P, Hachet O, Hersch M, Rincon SA, Berthelot-Grosjean M, Dalessi S, Basterra L,Bergmann S, Paoletti A and Martin SG.

Cell Cycle. 2014; 13(4):538-52
 

Role of methyl salicylate on oviposition deterrence in Arabidopsis thaliana.

Groux R., Hilfiker O., Gouhier-Darimont C., Peñaflor M.F.G.V., Erb M., and Reymond P.

Journal of Chemical Ecology, 2014, 40:754-759

 

Differentially phased leaf growth and movements in Arabidopsis depend on coordinated circadian and light regulation.

Dornbusch T., Michaud O., Xenarios I., Fankhauser C.

Pant Cell, 2014, 26(10) pp. 3911-3921
 

 

Plasma membrane H+-ATPase regulation is required for auxin gradient formation preceding phototropic growth.

Hohm T., Demarsy E., Quan C., Allenbach Petrolati L., Preuten T., Vernoux T., Bergmann S., Fankhauser C. 

Molecular Systems Biology, 2014, 10(9) p. 751

 

An operon of three transcriptional regulators controls horizontal gene transfer of the Integrative and Conjugative Element ICEclc in Pseudomonas knackmussii B13.

Pradervand N., Sulser S., Delavat F., Miyazaki R., Lamas I., van der Meer J.R.

PLoS Genet, 2014, 10(6): e1004441
 

 

 

2013

In vitro characterization of PlySK1249, a novel phage lysin, and assessment of its antibacterial activity in a mouse model of Streptococcus agalactiae bacteremia.

Oechslin F., Daraspe J., Giddey M., Moreillon P., Resch G.

Antimicrob Agents Chemother. 2013 Dec;57(12):6276-83
 

 

Genome-wide transposon insertion scanning of environmental survival functions in the polycyclic aromatic hydrocarbon degrading bacterium Sphingomonas wittichii RW1.

Roggo C., Coronado E., Moreno-Forero S.K., Harshman K., Weber J., van der Meer J.R.

Environ Microbiol, 2013, 15(10):2681-2695
 

 

 

2012

Genome-Wide Analysis of Salicylate and Dibenzofuran Metabolism in Sphingomonas wittichii RW1.

Coronado E., Roggo C., Johnson D.R., van der Meer J.R.

Front. Microbiology, 2012, 3:300
 

 

 

2011

A phosphorylation cycle shapes gradients of the DYRK-family kinase Pom1 at the plasma membrane.

Hachet O., Berthelot-Grosjean M., Kokkoris K., Vincenzetti V., Moosbrugger J. and Martin SG.

Cell 145 (2011): 1116-1128
 

 

 

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